SMTL ID : 5mw5.1

Human Jagged2 C2-EGF2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.127 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.127

3 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: D.25, D.39, E.40, D.42 Ligands: CA.3 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.25, A:D.39, A:E.40, A:D.42, H2O.1 CA.3: 7 residues within 4Å: Chain A: D.25, D.42, D.124, W.125, D.126 Ligands: CA.2, CA.4 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.25, A:D.25, A:D.124, A:W.125, A:D.126 CA.4: 6 residues within 4Å: Chain A: C.24, D.25, D.124, D.126, L.135 Ligands: CA.3 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:C.24, A:D.25, A:D.124, A:D.126, A:D.126

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Suckling, R.J. et al., Structural and functional dissection of the interplay between lipid and Notch binding by human Notch ligands. EMBO J. (2017)

Release Date

2017-06-14

Peptides

Protein jagged-2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein jagged-2

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