SMTL ID : 5mwn.1

Structure of the EAEC T6SS component TssK N-terminal domain in complex with llama nanobodies nbK18 and nbK27

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-3-3-1-mer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain C: W.162, L.163, T.164 Chain F: R.100, Y.103 4 PLIP interactions: 2 interactions with chain F, 2 interactions with chain C Water bridges: F:R.100 Salt bridges: F:R.100 Hydrogen bonds: C:T.164, C:T.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nguyen, V.S. et al., Type VI secretion TssK baseplate protein exhibits structural similarity with phage receptor-binding proteins and evolved to bind the membrane complex. Nat Microbiol (2017)

Release Date

2017-06-28

Peptides

Type VI secretion protein: ABC
llama nanobody raised against TssK, nbK18: DEF
llama nanobody raised against TssK, nbK27: G

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
N

Type VI secretion protein

llama nanobody raised against TssK, nbK18

llama nanobody raised against TssK, nbK27

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