SMTL ID : 5n1x.2 (3 other biounits)

Crystal structure of the BCL6 BTB domain in complex with pyrazolo-pyrimidine ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

monomer

Ligands

2 x 8HH: ~{N}-ethyl-5-pyridin-3-yl-pyrazolo[1,5-a]pyrimidin-7-amine(Non-covalent)

8HH.1: 3 residues within 4Å: Chain A: N.15, R.18, L.19 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:N.15, A:R.18, A:L.19 Hydrogen bonds: A:R.18 8HH.2: 6 residues within 4Å: Chain A: M.45, A.46, C.47, S.48, G.49, Y.52 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Y.52 Hydrogen bonds: A:M.45

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McCoull, W. et al., Discovery of Pyrazolo[1,5-a]pyrimidine B-Cell Lymphoma 6 (BCL6) Binders and Optimization to High Affinity Macrocyclic Inhibitors. J. Med. Chem. (2017)

Release Date

2017-05-17

Peptides

B-cell lymphoma 6 protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B-cell lymphoma 6 protein

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