SMTL ID : 5n22.1 (3 other biounits)

Structure of xEco2 acetyltransferase domain bound to K106-CoA conjugate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

hetero-oligomer

Ligands

1 x 8HB: (2~{S})-2-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethylsulfanyl]propanoic acid(Non-covalent)

8HB.1: 26 residues within 4Å: Chain A: E.42, L.43, I.117, S.118, R.119, I.120, W.121, V.122, R.127, R.128, K.129, A.130, I.131, A.132, S.133, F.156, S.157, D.158, P.159, T.160, D.162, G.163, L.165, F.166, T.169 Chain B: K.8 25 PLIP interactions: 25 interactions with chain A Hydrophobic interactions: A:A.132, A:F.166 Hydrogen bonds: A:I.120, A:I.120, A:V.122, A:R.128, A:A.130, A:I.131, A:A.132, A:S.133, A:S.133, A:T.160, A:D.162, A:D.162, A:D.162 Water bridges: A:R.127, A:R.128, A:R.128, A:K.129, A:K.129, A:D.162, A:T.169 Salt bridges: A:R.128 pi-Cation interactions: A:R.128, A:R.128

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chao, W.C. et al., Structural Basis of Eco1-Mediated Cohesin Acetylation. Sci Rep (2017)

Release Date

2017-03-15

Peptides

XEco2: A
GLY-ALA-LYS-LYX-ASP-GLN-TYR-PHE-LEU: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
E

XEco2

GLY-ALA-LYS-LYX-ASP-GLN-TYR-PHE-LEU

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