SMTL ID : 5n4f.1

Prolyl oligopeptidase B from Galerina marginata - apo protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain A: V.337, I.353, L.361, V.364, A.374, I.375, Y.376, Y.385, Y.387 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.374 GOL.2: 7 residues within 4Å: Chain A: D.400, F.401, V.402, N.424, F.458, E.459, S.460 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.400, A:V.402, A:N.424, A:F.458, A:S.460 Water bridges: A:N.424, A:F.458

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Czekster, C.M. et al., Characterization of a dual function macrocyclase enables design and use of efficient macrocyclization substrates. Nat Commun (2017)

Release Date

2017-11-01

Peptides

Prolyl oligopeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Prolyl oligopeptidase