SMTL ID : 5na4.1

NADH:quinone oxidoreductase (NDH-II) from Staphylococcus aureus - E172S mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 33 residues within 4Å: Chain A: G.18, A.19, G.20, Y.21, A.22, N.45, K.46, N.47, Y.51, A.53, T.54, H.57, A.87, E.88, V.89, A.114, L.115, G.116, F.117, I.134, F.174, T.175, L.276, G.307, D.308, T.323, T.324, A.325, Q.326, A.328, T.358, V.359, K.385 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:F.117, A:I.134, A:T.175 Hydrogen bonds: A:A.19, A:A.22, A:N.45, A:K.46, A:K.46, A:Y.51, A:V.89, A:V.89, A:F.117, A:D.308, A:D.308, A:T.323, A:A.325, A:Q.326, A:T.358, A:T.358, A:K.385 Water bridges: A:A.19, A:G.20, A:G.23, A:N.47, A:N.47, A:G.116, A:C.309, A:T.323, A:T.324

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sousa, F.M. et al., The key role of glutamate 172 in the mechanism of type II NADH:quinone oxidoreductase of Staphylococcus aureus. Biochim. Biophys. Acta (2017)

Release Date

2018-01-10

Peptides

NADH dehydrogenase-like protein SAOUHSC_00878: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NADH dehydrogenase-like protein SAOUHSC_00878