SMTL ID : 5nb0.1 (1 other biounit)

Crystal structures of homooligomers of collagen type IV. alpha3NC1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-hexamer

Ligands

12 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 6 residues within 4Å: Chain A: M.60, A.74, S.75, R.76, D.78, G.178 Ligand excluded by PLIP CL.2: 5 residues within 4Å: Chain A: Y.185, S.186 Chain D: F.64, N.66 Chain F: Y.189 Ligand excluded by PLIP CL.3: 5 residues within 4Å: Chain A: F.64, N.66 Chain B: Y.189 Chain D: Y.185, S.186 Ligand excluded by PLIP CL.4: 7 residues within 4Å: Chain B: M.60, A.74, S.75, R.76, N.77, D.78, G.178 Ligand excluded by PLIP CL.5: 5 residues within 4Å: Chain B: Y.185, S.186 Chain D: Y.189 Chain E: F.64, N.66 Ligand excluded by PLIP CL.6: 5 residues within 4Å: Chain B: F.64, N.66 Chain C: Y.189 Chain E: Y.185, S.186 Ligand excluded by PLIP CL.7: 6 residues within 4Å: Chain C: M.60, A.74, S.75, R.76, D.78, G.178 Ligand excluded by PLIP CL.8: 5 residues within 4Å: Chain C: Y.185, S.186 Chain E: Y.189 Chain F: F.64, N.66 Ligand excluded by PLIP CL.9: 6 residues within 4Å: Chain D: M.60, A.74, S.75, R.76, D.78, G.178 Ligand excluded by PLIP CL.10: 5 residues within 4Å: Chain E: M.60, A.74, R.76, D.78, G.178 Ligand excluded by PLIP CL.11: 5 residues within 4Å: Chain F: M.60, A.74, R.76, D.78, G.178 Ligand excluded by PLIP CL.12: 5 residues within 4Å: Chain A: Y.189 Chain C: F.64, N.66 Chain F: Y.185, S.186 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Casino, P. et al., Structures of collagen IV globular domains: insight into associated pathologies, folding and network assembly. IUCrJ (2018)

Release Date

2018-09-12

Peptides

Collagen alpha-3(IV) chain: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Collagen alpha-3(IV) chain

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