SMTL ID : 5nbv.1

Crystal structure of native alpha-1-antitrypsin with seven stabilising mutations

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.73 Å

Oligo State

monomer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain A: A.14, F.18, H.252, I.255, L.259, I.358, K.363, A.364, P.365 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.252, A:K.363 GOL.2: 8 residues within 4Å: Chain A: E.178, R.206, F.210, N.211, L.224, M.225, K.226, R.264 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:E.178, A:E.178, A:R.206, A:N.211, A:L.224, A:K.226, A:R.264, A:R.264 Water bridges: A:E.178 GOL.3: 2 residues within 4Å: Chain A: D.132, E.134 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.132 Water bridges: A:E.135

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Johnson, D.J.D. et al., CRYSTAL STRUCTURE OF THE Z VARIANT OF ALPHA-1-ANTITRYPSIN REVEALS STRUCTURAL AND DYNAMICAL CHANGES AND SUPPORTS A C-TERMINAL DOMAIN SWAP MECHANISM OF POLYMERIZATION. To Be Published

Release Date

2018-03-21

Peptides

Alpha-1-antitrypsin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-1-antitrypsin