SMTL ID : 5ndd.1

Crystal structure of a thermostabilised human protease-activated receptor-2 (PAR2) in complex with AZ8838 at 2.8 angstrom resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x 8TZ: (~{S})-(4-fluoranyl-2-propyl-phenyl)-(1~{H}-imidazol-2-yl)methanol(Non-covalent)

8TZ.1: 14 residues within 4Å: Chain A: L.207, Y.211, K.260, Y.263, H.264, W.270, I.281, F.284, Y.285, C.355, H.356, D.357, I.556, L.559 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.263, A:W.270, A:H.356 Hydrogen bonds: A:Y.211 Water bridges: A:K.260 pi-Stacking: A:F.284, A:H.356 Halogen bonds: A:I.281

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 5 residues within 4Å: Chain A: D.250, N.287, S.291, N.565, D.569 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.287

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 5 residues within 4Å: Chain A: Q.163, T.164, P.165, N.166, R.167 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.166, A:N.166, A:R.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cheng, R.K.Y. et al., Structural insight into allosteric modulation of protease-activated receptor 2. Nature (2017)

Release Date

2017-05-03

Peptides

Lysozyme,Proteinase-activated receptor 2,Soluble cytochrome b562,Proteinase-activated receptor 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Lysozyme,Proteinase-activated receptor 2,Soluble cytochrome b562,Proteinase-activated receptor 2

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