SMTL ID : 5nhn.1

Super-Folder Green Fluorescent Protein Artificiall dimer linked via 148 position

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

hetero-1-1-mer

Ligands

1 x DB5: [(4~{S})-4,5,6,7,8,9-hexahydro-1~{H}-cycloocta[d][1,2,3]triazol-4-yl] hydrogen carbonate(Covalent)

DB5.1: 9 residues within 4Å: Chain A: N.143, K.145, R.165, V.173 Chain B: N.143, F.145, R.165, N.167, V.173 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:F.145, B:R.165, B:V.173, A:V.173 Hydrogen bonds: A:N.143

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: K.98, D.99, N.132, V.173, Q.174, L.175 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.175 Water bridges: A:N.132, A:Q.174

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 5 residues within 4Å: Chain A: E.92, R.93, T.94, Y.179, Q.181 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.94, A:Q.181 Water bridges: A:T.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Worthy, H.L. et al., Positive functional synergy of structurally integrated artificial protein dimers assembled by Click chemistry. Commun Chem (2019)

Release Date

2018-09-26

Peptides

Green fluorescent protein: A
Green fluorescent protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Green fluorescent protein

Green fluorescent protein