SMTL ID : 5nlj.3 (2 other biounits)

Crystal structure of Zn3-E16V human ubiquitin (hUb) mutant adduct, from a solution 70 mM zinc acetate/20% v/v TFE/1.3 mM E16V hUb

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.53 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 3 residues within 4Å: Chain A: F.45, A.46, H.68 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:A.46 Hydrogen bonds: A:A.46 Water bridges: A:G.47 Salt bridges: A:H.68

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fermani, S. et al., Aggregation Pathways of Native-Like Ubiquitin Promoted by Single-Point Mutation, Metal Ion Concentration, and Dielectric Constant of the Medium. Chemistry (2018)

Release Date

2017-04-26

Peptides

Polyubiquitin-B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Polyubiquitin-B

Related Entries With Identical Sequence