SMTL ID : 5nm8.2 (1 other biounit)

Structure of PipY, the COG0325 family member of Synechococcus elongatus PCC7942, with PLP bound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

monomer

Ligands

1 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 11 residues within 4Å: Chain A: V.24, K.26, N.47, L.70, I.154, M.194, S.195, R.210, V.211, G.212, T.213 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.24, A:K.26, A:L.70, A:I.154 Hydrogen bonds: A:K.26, A:N.47, A:S.195, A:S.195, A:R.210, A:G.212, A:T.213, A:T.213

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 1 residues within 4Å: Chain A: P.63 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:P.63, H2O.1, H2O.2, H2O.2, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tremino, L. et al., Studies on cyanobacterial protein PipY shed light on structure, potential functions, and vitamin B6 -dependent epilepsy. FEBS Lett. (2017)

Release Date

2017-09-13

Peptides

PipY: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

PipY

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