SMTL ID : 5nn8.1

Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with acarbose

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.45 Å
Oligo State
monomer
Ligands
2 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x GLC- GLC- AC1: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
1 x GLC- AC1: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)
3 x SO4: SULFATE ION(Non-functional Binders)
3 x CL: CHLORIDE ION(Non-functional Binders)
15 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
1 x GOL: GLYCEROL(Non-functional Binders)
1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Roig-Zamboni, V. et al., Structure of human lysosomal acid alpha-glucosidase-a guide for the treatment of Pompe disease. Nat Commun (2017)
Release Date
2017-10-25
Peptides
Lysosomal alpha-glucosidase: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A

Lysosomal alpha-glucosidase

Related Entries With Identical Sequence

5nn3.1 | 5nn4.1 | 5nn5.1 | 5nn6.1 | 7p2z.1 | 7p32.1