SMTL ID : 5nnt.1

The dimeric structure of LL-37 crystallized in DPC

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.21 Å

Oligo State

homo-dimer

Ligands

2 x DPV: dodecyl 2-(trimethylammonio)ethyl phosphate(Non-covalent)

DPV.1: 8 residues within 4Å: Chain A: D.4, F.5, F.6, R.7 Chain B: R.23, I.24, F.27, L.28 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:F.27, B:L.28, A:F.5 Hydrogen bonds: A:F.6 DPV.2: 7 residues within 4Å: Chain A: R.23, I.24, F.27, L.28 Chain B: D.4, F.5, F.6 7 PLIP interactions: 4 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:R.23, A:I.24, A:F.27, A:L.28, B:F.6, B:F.6 Hydrogen bonds: B:F.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sancho-Vaello, E. et al., Structural remodeling and oligomerization of human cathelicidin on membranes suggest fibril-like structures as active species. Sci Rep (2017)

Release Date

2018-01-24

Peptides

Cathelicidin antimicrobial peptide: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cathelicidin antimicrobial peptide

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