- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 4 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)
- 2 x O: OXYGEN ATOM(Non-covalent)
O.3: 6 residues within 4Å:- Chain A: N.199, E.206, K.412
- Ligands: MGD.1, MGD.2, 4MO.4
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.199, A:K.412
- Water bridges: A:R.446
O.16: 6 residues within 4Å:- Chain C: H.198, N.199, H.450
- Ligands: MGD.14, MGD.15, 4MO.17
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:N.199, C:H.450, C:H.450
- 2 x 4MO: MOLYBDENUM(IV) ION(Non-covalent)
- 2 x F3S: FE3-S4 CLUSTER(Non-covalent)
F3S.5: 11 residues within 4Å:- Chain A: C.23, F.25, C.26, G.29, C.30, Y.32, S.101, R.103, G.104, T.243, N.244
3 PLIP interactions:3 interactions with chain A,- Metal complexes: A:C.23, A:C.26, A:C.30
F3S.18: 11 residues within 4Å:- Chain C: C.23, F.25, C.26, G.29, C.30, Y.32, S.101, R.103, G.104, T.243, N.244
3 PLIP interactions:3 interactions with chain C,- Metal complexes: C:C.23, C:C.26, C:C.30
- 6 x SO4: SULFATE ION(Non-functional Binders)
SO4.6: 4 residues within 4Å:- Chain A: R.403, R.405, R.439, P.440
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.403
- Water bridges: A:R.403
- Salt bridges: A:R.405
SO4.7: 3 residues within 4Å:- Chain A: R.275, K.389, W.393
4 PLIP interactions:4 interactions with chain A- Water bridges: A:K.389, A:E.392
- Salt bridges: A:R.275, A:K.389
SO4.8: 5 residues within 4Å:- Chain A: P.828, R.829
- Chain C: S.138, W.139, D.140
6 PLIP interactions:3 interactions with chain C, 3 interactions with chain A- Hydrogen bonds: C:W.139, C:D.140, A:R.829
- Water bridges: C:S.138, A:R.829
- Salt bridges: A:R.829
SO4.9: 5 residues within 4Å:- Chain A: S.138, W.139, D.140
- Chain C: P.828, R.829
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain C- Hydrogen bonds: A:W.139, A:D.140, C:R.829
- Water bridges: A:D.140, A:D.140
SO4.19: 3 residues within 4Å:- Chain C: R.405, R.439, P.440
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:R.403
- Salt bridges: C:R.405
SO4.20: 3 residues within 4Å:- Chain C: R.275, K.389, W.393
2 PLIP interactions:2 interactions with chain C- Salt bridges: C:R.275, C:K.389
- 1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.11: 2 residues within 4Å:- Chain A: G.475, Q.477
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:G.475, A:Q.477
GOL.21: 7 residues within 4Å:- Chain C: D.168, I.197, R.200, N.204, R.211, Y.454, D.459
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:D.168, C:R.200, C:R.211, C:R.211, C:D.459
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
FES.12: 8 residues within 4Å:- Chain B: C.60, H.62, K.63, G.64, A.65, C.78, H.81, S.83
4 PLIP interactions:4 interactions with chain B,- Metal complexes: B:C.60, B:H.62, B:C.78, B:H.81
FES.22: 7 residues within 4Å:- Chain D: C.60, H.62, K.63, G.64, C.78, H.81, S.83
4 PLIP interactions:4 interactions with chain D,- Metal complexes: D:C.60, D:H.62, D:C.78, D:H.81
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Santos-Silva, T. et al., Arsenite oxidase AioAB from Rhizobium sp. str. NT-26 mutant AioBF108A. To Be Published
- Release Date
- 2018-05-30
- Peptides
- AroA: AC
Arsenite oxidase small subunit AioB Rieske [2Fe-2S] cluster: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
EB
BD
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 4 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)
- 2 x O: OXYGEN ATOM(Non-covalent)
- 2 x 4MO: MOLYBDENUM(IV) ION(Non-covalent)
- 2 x F3S: FE3-S4 CLUSTER(Non-covalent)
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Santos-Silva, T. et al., Arsenite oxidase AioAB from Rhizobium sp. str. NT-26 mutant AioBF108A. To Be Published
- Release Date
- 2018-05-30
- Peptides
- AroA: AC
Arsenite oxidase small subunit AioB Rieske [2Fe-2S] cluster: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
EB
BD
F