SMTL ID : 5ntp.1

Structural states of RORgt: X-ray elucidation of molecular mechanisms and binding interactions for natural and synthetic compounds

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x 98E: (S)-N-(5-chloro-3-((4-(cyclopentanecarbonyl)-3-methylpiperazin-1-yl)methyl)-2-methylphenyl)-2-methylpyrimidine-5-carboxamide(Non-covalent)

98E.1: 19 residues within 4Å: Chain A: L.26, C.59, H.62, L.63, M.104, A.107, Y.108, V.115, F.116, F.117, F.127, L.130, L.135, F.140, S.143, H.218, R.221, L.222, F.225 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:L.26, A:M.104, A:A.107, A:V.115, A:V.115, A:V.115, A:F.117, A:F.127, A:L.130, A:L.135, A:F.140, A:R.221, A:L.222, A:F.225 Hydrogen bonds: A:F.116 pi-Cation interactions: A:H.62 Halogen bonds: A:S.143

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kallen, J. et al., Structural States of ROR gamma t: X-ray Elucidation of Molecular Mechanisms and Binding Interactions for Natural and Synthetic Compounds. ChemMedChem (2017)

Release Date

2017-06-21

Peptides

Nuclear receptor ROR-gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nuclear receptor ROR-gamma

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