SMTL ID : 5ntw.1 (3 other biounits)

Structural states of RORgt: X-ray elucidation of molecular mechanisms and binding interactions for natural and synthetic compounds

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 98N: (S)-N-((5-(ethylsulfonyl)pyridin-2-yl)methyl)-7-isopropyl-6-(((1r,4S)-4-(trifluoromethyl)cyclohexyl)methyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridine-3-carboxamide(Non-covalent)

98N.1: 24 residues within 4Å: Chain A: C.24, Q.25, L.26, L.31, W.56, C.59, H.62, R.103, M.104, R.106, A.107, V.115, F.116, F.117, F.127, L.130, C.132, L.135, I.136, I.139, F.140, H.218, R.221, Y.241 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:R.103, A:A.107, A:L.130, A:I.136, A:I.139, A:F.140 Hydrogen bonds: A:F.116 Water bridges: A:Q.25, A:Q.25, A:H.62, A:E.118 pi-Stacking: A:F.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kallen, J. et al., Structural States of ROR gamma t: X-ray Elucidation of Molecular Mechanisms and Binding Interactions for Natural and Synthetic Compounds. ChemMedChem (2017)

Release Date

2017-06-21

Peptides

Nuclear receptor ROR-gamma: A
Nuclear receptor-interacting protein 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
P

Nuclear receptor ROR-gamma

Nuclear receptor-interacting protein 1

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