SMTL ID : 5nur.1

Structural basis for maintenance of bacterial outer membrane lipid asymmetry

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.29 Å
Oligo State
hetero-3-3-mer
Ligands
1 x GP1- Z9M- KDO- KDO: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-6)-2-amino-2-deoxy-4-O-phosphono-beta-D-glucopyranose-(1-6)-2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose
1 x GP1- Z9M- KDO- KDO: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(3-4)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-6)-2-amino-2-deoxy-4-O-phosphono-beta-D-glucopyranose-(1-6)-2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose
1 x GP1- Z9M- KDO: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(3-6)-2-amino-2-deoxy-4-O-phosphono-beta-D-glucopyranose-(1-6)-2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose
3 x CA: CALCIUM ION(Non-covalent)
8 x SO4: SULFATE ION(Non-functional Binders)
3 x C8E: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Abellon-Ruiz, J. et al., Structural basis for maintenance of bacterial outer membrane lipid asymmetry. Nat Microbiol (2017)
Release Date
2017-10-25
Peptides
Outer membrane protein F: ACE
ABC transporter permease: BDF
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
C
C
A
E
E
B
D
D
B
F
F
Membrane
We predict this structure to be a membrane protein.

Outer membrane protein F

Toggle Identical (ACE)

ABC transporter permease

Toggle Identical (DF)

Related Entries With Identical Sequence

1opf.1 | 1opf.2 | 2omf.1 | 2zfg.1 | 2zld.1 | 2zld.2 | 2zld.3 | 3k19.1 | 3k19.2 | 3k19.3 | 3k19.4 | 3k1b.1 | 3k1b.2 | 3o0e.1 | 3o0e.2 | 3poq.1 | 3pou.1 | 3pox.1 | 3pox.2 | 4d5u.1 | 4d5u.2 | 4jfb.1 | 4jfb.2 | 5nuo.1 | 5nup.1 | 5nuq.1 | 5nuq.2 | 7nst.1 | 7nsu.1