SMTL ID : 5nzy.1

Crystal structure of DNA cross-link repair protein 1A in complex with Cefotaxime

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

1 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 4 residues within 4Å: Chain A: H.35, H.37, H.96, D.118 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.35, A:H.37, A:H.96, A:D.118, H2O.3, H2O.8

2 x CE3: (6R,7R)-3-(acetyloxymethyl)-7-[[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-methoxyimino-ethanoyl]amino]-8-oxo-5-thia-1-azabicy clo[4.2.0]oct-2-ene-2-carboxylic acid(Non-covalent)

CE3.2: 8 residues within 4Å: Chain A: I.240, N.241, F.242, R.263, T.265, Q.282, I.289, G.291 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:F.242 Water bridges: A:K.243, A:R.263, A:Q.282, A:Q.282 Salt bridges: A:K.284 CE3.3: 11 residues within 4Å: Chain A: T.3, P.5, F.6, Y.7, Q.21, D.39, V.319, N.320, V.321, G.322, R.327 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.3, A:Y.7, A:Y.7, A:N.320, A:V.321, A:R.327

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Newman, J.A. et al., Crystal structure of DNA cross-link repair protein 1A in complex with Cefotaxime. To Be Published

Release Date

2017-06-14

Peptides

DNA cross-link repair 1A protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA cross-link repair 1A protein

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