SMTL ID : 5o12.1

Crystal structure of PIM1 kinase in complex with small-molecule inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x 1RO: (5E)-5-(quinolin-6-ylmethylidene)-2-[(thiophen-2-ylmethyl)amino]-1,3-thiazol-4(5H)-one(Non-covalent)

1RO.1: 14 residues within 4Å: Chain A: L.29, S.31, S.36, V.37, A.50, K.52, H.53, L.105, E.106, R.107, V.111, L.159, I.170, D.171 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.29, A:V.37, A:A.50, A:K.52, A:L.105, A:I.170 Hydrogen bonds: A:D.171 Water bridges: A:D.171, A:D.171, A:F.172 pi-Cation interactions: A:K.52

1 x IMD: IMIDAZOLE(Non-covalent)

IMD.2: 4 residues within 4Å: Chain A: D.113, F.115, D.116, E.156 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.156, A:E.156

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bogusz, J. et al., Structural analysis of PIM1 kinase complexes with ATP-competitive inhibitors. Sci Rep (2017)

Release Date

2017-11-01

Peptides

Serine/threonine-protein kinase pim-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase pim-1

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