SMTL ID : 5o1p.1

Crystal structure of human aminoadipate semialdehyde synthase, saccharopine dehydrogenase.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) EDO.2: 5 residues within 4Å: Chain A: Y.203, T.258, M.260, L.292 Ligands: DMS.5 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.203, A:T.258 EDO.6: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) EDO.7: 5 residues within 4Å: Chain B: Y.203, T.258, M.260, L.292 Ligands: DMS.10 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:T.258, B:T.258

6 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3: 1 residues within 4Å: Chain A: W.223 2 PLIP interactions: 2 interactions with chain A pi-Cation interactions: A:W.223, A:W.223 DMS.4: 3 residues within 4Å: Chain A: M.184, I.282, F.470 No protein-ligand interaction detected (PLIP) DMS.5: 3 residues within 4Å: Chain A: S.259, D.261 Ligands: EDO.2 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:D.261 DMS.8: 1 residues within 4Å: Chain B: W.223 2 PLIP interactions: 2 interactions with chain B pi-Cation interactions: B:W.223, B:W.223 DMS.9: 3 residues within 4Å: Chain B: M.184, I.282, F.470 No protein-ligand interaction detected (PLIP) DMS.10: 3 residues within 4Å: Chain B: S.259, D.261 Ligands: EDO.7 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:D.261

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kopec, J. et al., Crystal structure of human aminoadipate semialdehyde synthase, saccharopine dehydrogenase. To Be Published

Release Date

2017-06-28

Peptides

Alpha-aminoadipic semialdehyde synthase, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Alpha-aminoadipic semialdehyde synthase, mitochondrial

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