- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- monomer
- Ligands
- 2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 15 x MAN: alpha-D-mannopyranose(Post Translational Modification)
MAN.3: 5 residues within 4Å:- Chain A: S.191, G.192, V.193
- Ligands: MAN.9, SO4.21
No protein-ligand interaction detected (PLIP)MAN.4: 6 residues within 4Å:- Chain A: Q.50, N.51, P.52, L.194, T.196, D.197
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.197
- Water bridges: A:Q.50, A:T.107
MAN.5: 3 residues within 4Å:- Chain A: H.200, T.202, D.203
2 PLIP interactions:2 interactions with chain A- Water bridges: A:H.200, A:D.203
MAN.6: 4 residues within 4Å:- Chain A: T.212, S.213, P.214, L.215
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:S.213
- Water bridges: A:N.216
MAN.7: 1 residues within 4Å:- Chain A: S.213
2 PLIP interactions:2 interactions with chain A- Water bridges: A:G.122, A:S.213
MAN.8: 5 residues within 4Å:- Chain A: G.116, V.117, T.230, S.231
- Ligands: MAN.11
No protein-ligand interaction detected (PLIP)MAN.9: 4 residues within 4Å:- Chain A: T.223, V.224
- Ligands: MAN.3, SO4.21
4 PLIP interactions:4 interactions with chain A- Water bridges: A:S.191, A:S.191, A:S.226, A:S.226
MAN.10: 1 residues within 4Å:- Chain A: S.226
No protein-ligand interaction detected (PLIP)MAN.11: 6 residues within 4Å:- Chain A: L.120, V.132, S.231, V.232, Q.234
- Ligands: MAN.8
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:V.232
- Water bridges: A:Q.234
MAN.12: 8 residues within 4Å:- Chain A: Q.78, N.136, N.137, T.139, S.236, S.237, A.238
- Ligands: NAG.2
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:Q.78, A:N.137, A:S.237
- Water bridges: A:A.238, A:A.239, A:A.239
MAN.13: 9 residues within 4Å:- Chain A: V.8, I.9, N.10, G.11, T.74, I.75, L.76, V.141, S.237
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:G.11, A:T.74, A:T.74
- Water bridges: A:N.10, A:A.233
MAN.14: 3 residues within 4Å:- Chain A: N.10, T.240, A.241
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.10
MAN.15: 3 residues within 4Å:- Chain A: W.13, A.241, T.242
No protein-ligand interaction detected (PLIP)MAN.16: 1 residues within 4Å:- Chain A: S.244
No protein-ligand interaction detected (PLIP)MAN.17: 7 residues within 4Å:- Chain A: Y.14, H.66, A.67, S.68, A.243, S.244, T.246
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:Y.14, A:H.66, A:S.68, A:S.68
- Water bridges: A:Y.14, A:Y.14, A:Y.14
- 1 x CU: COPPER (II) ION(Non-covalent)
- 3 x SO4: SULFATE ION(Non-functional Binders)
SO4.19: 5 residues within 4Å:- Chain A: H.1, H.86, H.163, Q.172
- Ligands: CU.18
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:Q.172
- Water bridges: A:S.164, A:S.164
- Salt bridges: A:H.86, A:H.163
SO4.20: 4 residues within 4Å:- Chain A: S.121, G.122, G.126, T.127
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.127, A:T.127
- Water bridges: A:G.126, A:G.126
SO4.21: 4 residues within 4Å:- Chain A: P.222, T.223
- Ligands: MAN.3, MAN.9
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:T.223
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hansson, H. et al., High-resolution structure of a lytic polysaccharide monooxygenase from Hypocrea jecorina reveals a predicted linker as an integral part of the catalytic domain. J. Biol. Chem. (2017)
- Release Date
- 2017-09-20
- Peptides
- Glycoside hydrolase family 61: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- monomer
- Ligands
- 2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 15 x MAN: alpha-D-mannopyranose(Post Translational Modification)
- 1 x CU: COPPER (II) ION(Non-covalent)
- 3 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hansson, H. et al., High-resolution structure of a lytic polysaccharide monooxygenase from Hypocrea jecorina reveals a predicted linker as an integral part of the catalytic domain. J. Biol. Chem. (2017)
- Release Date
- 2017-09-20
- Peptides
- Glycoside hydrolase family 61: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A