- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-trimer
- Ligands
- 9 x CU: COPPER (II) ION(Non-covalent)
- 14 x GOL: GLYCEROL(Non-functional Binders)
GOL.4: 7 residues within 4Å:- Chain A: Q.257, N.261, K.262, I.263
- Chain C: K.262, D.268
- Ligands: GOL.7
6 PLIP interactions:4 interactions with chain A, 2 interactions with chain C- Hydrogen bonds: A:Q.257, A:Q.257, A:N.261, A:I.263, C:K.262, C:K.262
GOL.5: 8 residues within 4Å:- Chain A: G.152, Y.153, W.154, R.245, S.269
- Chain B: Q.257, V.258, I.259
8 PLIP interactions:5 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:Y.153, A:Y.153, B:Q.257
- Water bridges: A:S.269, A:S.269, A:G.271, B:Q.257, B:D.260
GOL.6: 9 residues within 4Å:- Chain A: A.151, G.152, Y.153, I.179, V.180, R.181, D.185, R.245, T.246
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:G.152, A:Y.153, A:R.181, A:D.185, A:R.245, A:T.246
GOL.7: 11 residues within 4Å:- Chain A: D.243, K.262, I.263
- Chain B: K.262, I.263
- Chain C: D.243, K.262, I.263
- Ligands: GOL.4, GOL.12, GOL.22
No protein-ligand interaction detected (PLIP)GOL.8: 4 residues within 4Å:- Chain A: R.50, L.79, I.80, E.81
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:E.81, A:E.81
GOL.12: 7 residues within 4Å:- Chain A: K.262, D.268
- Chain B: Q.257, N.261, K.262, I.263
- Ligands: GOL.7
7 PLIP interactions:4 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:Q.257, B:Q.257, B:N.261, B:I.263, A:K.262, A:K.262
- Water bridges: A:D.243
GOL.13: 9 residues within 4Å:- Chain B: G.152, Y.153, W.154, N.244, R.245, S.269
- Chain C: Q.257, V.258, I.259
8 PLIP interactions:4 interactions with chain B, 4 interactions with chain C- Hydrogen bonds: B:Y.153, C:Q.257
- Water bridges: B:R.245, B:S.269, B:S.269, C:Q.257, C:Q.257, C:D.260
GOL.14: 5 residues within 4Å:- Chain B: K.117, V.160, G.162, T.163, E.164
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:K.117, B:K.117, B:G.162, B:T.163
GOL.15: 1 residues within 4Å:- Chain B: D.97
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:D.97
GOL.16: 10 residues within 4Å:- Chain B: A.151, G.152, Y.153, I.179, V.180, R.181, D.185, E.221, R.245, T.246
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:G.152, B:R.181, B:R.245
- Water bridges: B:Y.153, B:T.246
GOL.17: 5 residues within 4Å:- Chain B: R.50, V.52, L.79, I.80, E.81
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:R.50, B:E.81, B:E.81
GOL.21: 9 residues within 4Å:- Chain A: Q.257, V.258, I.259
- Chain C: G.152, Y.153, W.154, N.244, R.245, S.269
8 PLIP interactions:5 interactions with chain C, 3 interactions with chain A- Hydrogen bonds: C:Y.153, C:S.269, A:Q.257
- Water bridges: C:N.244, C:S.269, C:S.269, A:Q.257, A:Q.257
GOL.22: 7 residues within 4Å:- Chain B: K.262, D.268
- Chain C: Q.257, N.261, K.262, I.263
- Ligands: GOL.7
6 PLIP interactions:2 interactions with chain B, 4 interactions with chain C- Hydrogen bonds: B:K.262, B:K.262, C:Q.257, C:Q.257, C:N.261, C:I.263
GOL.23: 9 residues within 4Å:- Chain C: A.151, G.152, Y.153, I.179, V.180, R.181, D.185, R.245, T.246
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:G.152, C:Y.153, C:R.181, C:R.245
- 1 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gabdulkhakov, A.G. et al., Incorporation of Copper Ions into T2/T3 Centers of Two-Domain Laccases. Mol.Biol.(Moscow) (2018)
- Release Date
- 2018-03-28
- Peptides
- Two-domain laccase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
DB
EC
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-trimer
- Ligands
- 9 x CU: COPPER (II) ION(Non-covalent)
- 14 x GOL: GLYCEROL(Non-functional Binders)
- 1 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gabdulkhakov, A.G. et al., Incorporation of Copper Ions into T2/T3 Centers of Two-Domain Laccases. Mol.Biol.(Moscow) (2018)
- Release Date
- 2018-03-28
- Peptides
- Two-domain laccase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
DB
EC
F