SMTL ID : 5o4o.1

HER3 in complex with Fab MF3178

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 7 residues within 4Å: Chain C: H.405, M.406, H.407, N.408, S.440, P.512, Q.516 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 4 residues within 4Å: Chain C: N.469, T.471, K.472, S.506 No protein-ligand interaction detected (PLIP)

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)

NAG.3: 3 residues within 4Å: Chain C: L.326, V.352, N.353 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:V.352 Hydrogen bonds: C:N.353 NAG.4: 3 residues within 4Å: Chain C: R.388, T.389, N.414 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:R.388, C:T.389 Hydrogen bonds: C:R.388 NAG.5: 4 residues within 4Å: Chain C: P.404, H.405, H.407, N.437 No protein-ligand interaction detected (PLIP) NAG.6: 1 residues within 4Å: Chain C: N.522 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:N.522

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Geuijen, C.A.W. et al., Unbiased Combinatorial Screening Identifies a Bispecific IgG1 that Potently Inhibits HER3 Signaling via HER2-Guided Ligand Blockade. Cancer Cell (2018)

Release Date

2018-05-16

Peptides

MF3178 FAB light chain: A
MF3178 FAB heavy chain: B
Receptor tyrosine-protein kinase erbB-3: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

MF3178 FAB light chain

MF3178 FAB heavy chain

Receptor tyrosine-protein kinase erbB-3

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