SMTL ID : 5o67.1

Crystal structure of the FapF polypeptide transporter - F103A mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.84 Å

Oligo State

hetero-1-2-mer

Ligands

5 x LDA: LAURYL DIMETHYLAMINE-N-OXIDE(Non-covalent)

LDA.1: 4 residues within 4Å: Chain A: A.27, S.213, S.215, Q.246 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:Q.246 LDA.2: 3 residues within 4Å: Chain B: S.213, S.215, Q.246 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:Q.246 LDA.3: 5 residues within 4Å: Chain A: F.247, I.269 Chain B: Y.44, D.76, W.78 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:F.247, A:I.269, B:Y.44, B:W.78 LDA.4: 6 residues within 4Å: Chain C: A.27, S.28, G.29, S.213, S.215, Q.246 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:Q.246 LDA.5: 3 residues within 4Å: Chain C: F.38, Y.332, F.334 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:F.38, C:F.38, C:F.334

3 x C8E: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE(Non-functional Binders)

C8E.6: 2 residues within 4Å: Chain C: F.94 Ligands: C8E.7 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:F.94, C:F.94 C8E.7: 3 residues within 4Å: Chain C: V.96, F.136 Ligands: C8E.6 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:F.136 C8E.8: 1 residues within 4Å: Chain C: K.203 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rouse, S.L. et al., A new class of hybrid secretion system is employed in Pseudomonas amyloid biogenesis. Nat Commun (2017)

Release Date

2017-08-23

Peptides

FapF: A
FapF: BC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Membrane

We predict this structure to be a membrane protein.
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FapF

FapF