SMTL ID : 5o6c.1

Crystal Structure of a threonine-selective RCR E3 ligase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.13, C.16, H.36, C.39 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.13, A:C.16, A:H.36, A:C.39 ZN.2: 4 residues within 4Å: Chain A: C.31, H.33, C.60, C.63 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.31, A:H.33, A:C.60, A:C.63 ZN.3: 4 residues within 4Å: Chain A: C.129, C.132, C.160, C.163 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.129, A:C.132, A:C.160, A:C.163 ZN.4: 5 residues within 4Å: Chain A: C.172, H.175, C.254, V.256, C.257 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.172, A:H.175, A:C.254, A:C.257 ZN.5: 4 residues within 4Å: Chain A: C.184, C.187, C.202, C.205 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.184, A:C.187, A:C.202, A:C.205 ZN.6: 4 residues within 4Å: Chain A: C.188, C.223, C.237, H.243 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.188, A:C.223, A:C.237, A:H.243

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pao, K.C. et al., Activity-based E3 ligase profiling uncovers an E3 ligase with esterification activity. Nature (2018)

Release Date

2018-04-18

Peptides

E3 ubiquitin-protein ligase MYCBP2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase MYCBP2