SMTL ID : 5ogo.1

Crystal structure of chimeric carbonic anhydrase I with 3-(Benzylamino)-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.99 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.94, H.96, E.106, H.119, T.198 Ligands: WWO.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.94, A:H.96, A:H.119

2 x WWO: 3-(benzylamino)-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide(Non-covalent)

WWO.2: 19 residues within 4Å: Chain A: H.64, H.67, F.91, Q.92, H.94, H.96, H.119, L.130, A.134, L.140, V.142, L.197, T.198, H.199, P.200, P.201, W.208 Ligands: ZN.1, WWO.3 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.91, A:F.91, A:L.130, A:L.130, A:A.134, A:L.140, A:L.197 Hydrogen bonds: A:H.67, A:Q.92, A:T.198, A:T.198 Halogen bonds: A:T.198, A:H.199, A:P.200 WWO.3: 8 residues within 4Å: Chain A: H.67, E.69, F.91, Q.92, D.129, L.130, G.131 Ligands: WWO.2 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:D.129, A:L.130 Hydrogen bonds: A:E.69, A:E.69, A:Q.92

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.4: 4 residues within 4Å: Chain A: Y.7, D.242, W.244, P.246 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:D.242 pi-Cation interactions: A:W.244, A:W.244

3 x BCN: BICINE(Non-covalent)

BCN.5: 4 residues within 4Å: Chain A: K.148, K.212, E.213, P.214 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.148, A:K.148 Water bridges: A:Y.114, A:Y.114 Salt bridges: A:K.212 BCN.9: 7 residues within 4Å: Chain A: S.99, L.100, L.223, R.226, L.239, V.241 Ligands: BCN.10 1 PLIP interactions: 1 interactions with chain A Water bridges: A:S.99 BCN.10: 6 residues within 4Å: Chain A: S.99, L.100, D.101, L.223, R.226 Ligands: BCN.9 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.99, A:R.226 Water bridges: A:R.226 Salt bridges: A:D.101, A:R.226

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.6: 3 residues within 4Å: Chain A: H.17, K.18, P.21 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.17 Water bridges: A:H.17

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.7: 3 residues within 4Å: Chain A: P.83, L.84, T.207 3 PLIP interactions: 3 interactions with chain A Water bridges: A:Y.88, A:Y.88, A:T.207 EDO.8: 6 residues within 4Å: Chain A: P.46, L.47, L.188, D.189, Y.190, S.258 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.47, A:D.189, A:S.258

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smirnov, A. et al., Crystal structure of chimeric carbonic anhydrase I with 3-(Benzylamino)-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide. To be published

Release Date

2018-08-01

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2