SMTL ID : 5ogx.1

Crystal structure of Amycolatopsis cytochrome P450 reductase GcoB.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 20 residues within 4Å: Chain A: S.36, Y.135, R.147, Q.148, Y.149, S.150, H.164, V.165, R.166, V.168, G.171, V.172, A.173, T.174, T.217, K.331, F.332, T.333, P.334, S.336 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:Y.135, A:Q.148, A:Q.148, A:F.332, A:F.332 Hydrogen bonds: A:Q.148, A:Q.148, A:Y.149, A:S.150, A:H.164, A:R.166, A:V.172, A:A.173, A:T.174, A:T.217, A:S.336, A:S.336, A:S.336, A:S.336 Water bridges: A:H.164, A:F.332, A:A.335 Salt bridges: A:R.147, A:R.147 pi-Stacking: A:Y.149, A:F.332

1 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)

FES.2: 10 residues within 4Å: Chain A: N.35, S.36, C.37, N.38, G.40, T.41, C.42, G.43, C.45, C.77 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.37, A:C.42, A:C.45, A:C.77

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 6 residues within 4Å: Chain A: M.33, P.34, C.45, L.47, A.76, S.89 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:C.45, A:S.89

1 x BR: BROMIDE ION(Non-covalent)

BR.4: 5 residues within 4Å: Chain A: R.101, L.103, T.104, A.125, E.126 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mallinson, S.J.B. et al., A promiscuous cytochrome P450 aromatic O-demethylase for lignin bioconversion. Nat Commun (2018)

Release Date

2018-07-04

Peptides

Cytochrome P450 reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome P450 reductase