- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.71 Å
- Oligo State
- homo-tetramer
- Ligands
- 24 x GOL: GLYCEROL(Non-functional Binders)
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.8: 5 residues within 4Å:- Chain A: Y.204, Q.205, R.206, D.221, D.225
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:Q.205, A:R.206, A:D.225
- Water bridges: A:R.206, A:N.209, A:N.209, A:D.221
PEG.24: 5 residues within 4Å:- Chain C: Y.204, Q.205, R.206, D.221, D.225
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:Q.205, C:R.206, C:D.225
- Water bridges: C:R.206, C:N.209, C:N.209, C:D.221
- 2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
PGE.9: 6 residues within 4Å:- Chain A: R.133, E.144, D.274, Y.275
- Chain B: E.347, R.402
2 PLIP interactions:2 interactions with chain B- Water bridges: B:R.402, B:R.402
PGE.25: 6 residues within 4Å:- Chain C: R.133, E.144, D.274, Y.275
- Chain D: E.347, R.402
2 PLIP interactions:2 interactions with chain D- Water bridges: D:R.402, D:R.402
- 4 x 9WN: (2R)-2-(alpha-D-glucopyranosyloxy)-3-hydroxypropanoic acid(Non-covalent)
9WN.10: 15 residues within 4Å:- Chain A: A.33, Y.38, W.42, W.44, D.45, H.80, Y.90, Q.117, W.179, G.182, R.218, Y.377, W.378, Q.436, W.438
15 PLIP interactions:15 interactions with chain A- Hydrogen bonds: A:Y.38, A:W.44, A:D.45, A:D.45, A:H.80, A:Q.117, A:G.182, A:Y.224, A:Y.377, A:Y.377, A:Q.436
- Water bridges: A:Y.90, A:A.184, A:R.218
- Salt bridges: A:R.218
9WN.16: 15 residues within 4Å:- Chain B: A.33, Y.38, W.42, W.44, D.45, H.80, Y.90, Q.117, W.179, G.182, R.218, Y.377, W.378, Q.436, W.438
16 PLIP interactions:16 interactions with chain B- Hydrogen bonds: B:W.44, B:D.45, B:D.45, B:H.80, B:Y.90, B:Y.90, B:Q.117, B:G.182, B:Y.377, B:Q.436
- Water bridges: B:Y.38, B:Y.38, B:A.184, B:R.218, B:R.218
- Salt bridges: B:R.218
9WN.26: 15 residues within 4Å:- Chain C: A.33, Y.38, W.42, W.44, D.45, H.80, Y.90, Q.117, W.179, G.182, R.218, Y.377, W.378, Q.436, W.438
15 PLIP interactions:15 interactions with chain C- Hydrogen bonds: C:Y.38, C:W.44, C:D.45, C:D.45, C:H.80, C:Q.117, C:G.182, C:Y.224, C:Y.377, C:Y.377, C:Q.436
- Water bridges: C:Y.90, C:A.184, C:R.218
- Salt bridges: C:R.218
9WN.32: 15 residues within 4Å:- Chain D: A.33, Y.38, W.42, W.44, D.45, H.80, Y.90, Q.117, W.179, G.182, R.218, Y.377, W.378, Q.436, W.438
16 PLIP interactions:16 interactions with chain D- Hydrogen bonds: D:W.44, D:D.45, D:D.45, D:H.80, D:Y.90, D:Y.90, D:Q.117, D:G.182, D:Y.377, D:Q.436
- Water bridges: D:Y.38, D:Y.38, D:A.184, D:R.218, D:R.218
- Salt bridges: D:R.218
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cereija, T.B. et al., The structural characterization of a glucosylglycerate hydrolase provides insights into the molecular mechanism of mycobacterial recovery from nitrogen starvation. Iucrj (2019)
- Release Date
- 2018-08-08
- Peptides
- Uncharacterized protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.71 Å
- Oligo State
- homo-tetramer
- Ligands
- 24 x GOL: GLYCEROL(Non-functional Binders)
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
- 4 x 9WN: (2R)-2-(alpha-D-glucopyranosyloxy)-3-hydroxypropanoic acid(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cereija, T.B. et al., The structural characterization of a glucosylglycerate hydrolase provides insights into the molecular mechanism of mycobacterial recovery from nitrogen starvation. Iucrj (2019)
- Release Date
- 2018-08-08
- Peptides
- Uncharacterized protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B