SMTL ID : 5okm.2 (7 other biounits)

Crystal structure of human SHIP2 Phosphatase-C2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

monomer

Ligands

1 x B3P: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

B3P.1: 8 residues within 4Å: Chain A: G.33, L.34, G.35, K.36, T.37, D.39, E.40, D.294 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:T.37, A:T.37, A:T.37, A:D.39, A:D.39, A:D.39, A:E.40, A:D.294 Water bridges: A:G.33

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: T.115, G.116, Q.157, N.158, D.161 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.157, A:N.158, A:D.161 EDO.3: 9 residues within 4Å: Chain A: T.342, A.343, S.344, R.345, S.371, N.373, I.374, F.376, L.377 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.343, A:F.376 Water bridges: A:R.345, A:N.373 EDO.4: 6 residues within 4Å: Chain A: T.30, L.38, V.41, T.44, I.45, H.47 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:I.45 Water bridges: A:T.30, A:H.47, A:H.47 EDO.5: 5 residues within 4Å: Chain A: E.337, A.338, K.378, V.379, Q.380 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.338, A:V.379, A:V.379, A:Q.380

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Le Coq, J. et al., Structural basis for interdomain communication in SHIP2 providing high phosphatase activity. Elife (2017)

Release Date

2017-08-23

Peptides

Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2

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