SMTL ID : 5oln.2 (1 other biounit)

X-Ray Structure of the Complex Pyrimidine-nucleoside phosphorylase from Bacillus subtilis at 1.88 A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

monomer

Ligands

2 x IMD: IMIDAZOLE(Non-covalent)(Non-functional Binders)

IMD.1: 5 residues within 4Å: Chain A: Y.166, R.169, I.181, S.184, I.185 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.169, A:R.169, A:S.184 IMD.2: 0 residues within 4Å: (No contacts) 1 PLIP interactions: 1 interactions with chain A Water bridges: A:L.168

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: T.93, K.109, S.111, T.121 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.93, A:T.93, A:S.111, A:T.121, A:T.121 Salt bridges: A:K.109

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Balaev, V.V. et al., Crystal structure of pyrimidine-nucleoside phosphorylase from Bacillus subtilis in complex with imidazole and sulfate. Acta Crystallogr F Struct Biol Commun (2018)

Release Date

2018-04-18

Peptides

Pyrimidine-nucleoside phosphorylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Pyrimidine-nucleoside phosphorylase

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