SMTL ID : 5oml.4 (3 other biounits)

Crystal structure of Trypanosoma Brucei PEX14 N-terminal domain in complex with small molecules to investigate the water envelope

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x 9YB: (3~{R})-3-[[1-(2-hydroxyethyl)-5-[(4-methoxynaphthalen-1-yl)methyl]-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridin-3-yl]carbonylamino]-3-phenyl-propanoic acid(Non-covalent)

9YB.1: 13 residues within 4Å: Chain A: N.14, A.15, E.17, F.18, D.21, R.23, T.27, S.31, K.32, F.35, L.36, K.39, L.41 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:N.14, A:R.23, A:L.36, A:K.39, A:L.41 Hydrogen bonds: A:D.21 Water bridges: A:N.14, A:F.18, A:K.39 Salt bridges: A:K.39 pi-Stacking: A:F.18, A:F.18, A:F.35

1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.2: 2 residues within 4Å: Chain A: C.47, E.48 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ratkova, E.L. et al., Crystal structure of Trypanosoma Brucei PEX14 N-terminal domain in complex with small molecules to investigate the water envelope. To Be Published

Release Date

2019-03-06

Peptides

Peroxin 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Peroxin 14

Related Entries With Identical Sequence