SMTL ID : 5omy.1

HIGH-SALT STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA) IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR 4P

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x 9YE: 4-(3-methylbut-2-enoxy)-5-propan-2-yl-7,8-dihydro-6~{H}-indeno[1,2-b]indole-9,10-dione(Non-covalent)

9YE.1: 15 residues within 4Å: Chain A: L.45, G.46, G.48, S.51, V.53, V.66, K.68, I.95, F.113, N.118, D.120, H.160, M.163, I.174, D.175 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.53, A:V.53, A:V.53, A:V.66, A:I.95, A:I.174 Hydrogen bonds: A:D.175

5 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: V.11, H.148, T.314, A.315 Ligand excluded by PLIP CL.3: 3 residues within 4Å: Chain A: R.155, Y.188, N.189 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain A: K.229, F.232, H.234, R.244 Ligand excluded by PLIP CL.5: 4 residues within 4Å: Chain A: K.122, K.158, P.159, H.160 Ligand excluded by PLIP CL.6: 1 residues within 4Å: Chain A: E.187 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hochscherf, J. et al., Unexpected Binding Mode of a Potent Indeno[1,2-b]indole-Type Inhibitor of Protein Kinase CK2 Revealed by Complex Structures with the Catalytic Subunit CK2 alpha and Its Paralog CK2 alpha '. Pharmaceuticals (Basel) (2017)

Release Date

2017-12-27

Peptides

Casein kinase II subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Casein kinase II subunit alpha

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