SMTL ID : 5ore.1

Structure of the periplasmic binding protein (PBP) OccJ from agrobacterium tumefaciens B6

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 1 residues within 4Å: Chain A: Q.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.2, A:Q.2

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: D.27, D.32, K.248 Ligand excluded by PLIP CL.3: 1 residues within 4Å: Chain A: K.62 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain A: I.85, P.86, P.256 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vigouroux, A. et al., Structural basis for high specificity of octopine binding in the plant pathogen Agrobacterium tumefaciens. Sci Rep (2017)

Release Date

2017-12-20

Peptides

Octopine-binding periplasmic protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Octopine-binding periplasmic protein

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