SMTL ID : 5otf.1

MRCK beta in complex with BDP-00009066

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: G.392, F.393 Chain B: G.392, F.393 Ligands: CL.5 Ligand excluded by PLIP CL.5: 5 residues within 4Å: Chain A: G.392, F.393 Chain B: G.392, F.393 Ligands: CL.1 Ligand excluded by PLIP

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 9 residues within 4Å: Chain A: F.89, K.107, L.109, M.114, A.121, C.122, F.123, E.126, G.222 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.107, A:K.107, A:C.122, A:G.222 Water bridges: A:F.89, A:F.89 EDO.3: 5 residues within 4Å: Chain A: E.30, Q.72, T.406, S.409 Chain B: L.16 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:E.30, A:S.409, A:S.409 Water bridges: B:E.13 EDO.6: 9 residues within 4Å: Chain B: F.89, K.107, L.109, M.114, A.121, C.122, F.123, E.126, G.222 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:K.107, B:K.107, B:C.122, B:G.222 Water bridges: B:F.89, B:F.89 EDO.7: 5 residues within 4Å: Chain A: L.16 Chain B: E.30, Q.72, T.406, S.409 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:T.406, B:S.409, B:S.409 Water bridges: A:E.13

2 x AQ5: (6~{S})-8-(3-pyrimidin-4-yl-1~{H}-pyrrolo[2,3-b]pyridin-4-yl)-1,8-diazaspiro[5.5]undecane(Non-covalent)

AQ5.4: 16 residues within 4Å: Chain A: I.84, R.86, V.92, A.105, K.107, E.126, M.155, D.156, Y.157, Y.158, D.206, N.207, L.209, A.219, D.220, F.372 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.372 Hydrogen bonds: A:D.156, A:Y.158, A:D.220 AQ5.8: 16 residues within 4Å: Chain B: I.84, R.86, V.92, A.105, K.107, E.126, M.155, D.156, Y.157, Y.158, D.206, N.207, L.209, A.219, D.220, F.372 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:F.372 Hydrogen bonds: B:D.156, B:Y.158, B:D.220

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Unbekandt, M. et al., Discovery of Potent and Selective MRCK Inhibitors with Therapeutic Effect on Skin Cancer. Cancer Res. (2018)

Release Date

2018-02-21

Peptides

Serine/threonine-protein kinase MRCK beta: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Serine/threonine-protein kinase MRCK beta

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