SMTL ID : 5otq.1

The crystal structure of CK2alpha in complex with compound 33

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.38 Å

Oligo State

monomer

Ligands

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 5 residues within 4Å: Chain A: K.67, I.94, F.112, I.173, D.174 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.112 Hydrogen bonds: A:D.174 Water bridges: A:E.80, A:W.175 Salt bridges: A:K.67 ACT.2: 7 residues within 4Å: Chain A: K.76, R.79, R.154, L.177, N.188, R.190, V.191 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.191 Water bridges: A:R.154 Salt bridges: A:K.76, A:R.79, A:R.154

2 x AUH: 2-(1~{H}-benzimidazol-2-yl)-~{N}-[[4-(2-ethylphenyl)-3-methoxy-phenyl]methyl]ethanamine(Non-covalent)

AUH.3: 16 residues within 4Å: Chain A: L.44, G.45, V.52, F.120, Y.124, T.126, L.127, Y.135, I.139, P.158, H.159, V.161, I.163, I.173, M.220, M.224 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.44, A:V.52, A:Y.124, A:L.127, A:Y.135, A:I.139, A:V.161, A:I.163, A:I.163, A:I.173, A:M.224 Hydrogen bonds: A:N.117, A:V.161 Water bridges: A:I.163 AUH.4: 8 residues within 4Å: Chain A: Q.35, Y.38, L.40, V.66, I.68, D.102, T.107, A.109 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.40, A:I.68, A:I.68, A:D.102, A:A.109

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Iegre, J. et al., Second-generation CK2 alpha inhibitors targeting the alpha D pocket. Chem Sci (2018)

Release Date

2018-02-28

Peptides

Casein kinase II subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Casein kinase II subunit alpha

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