SMTL ID : 5ots.1

The crystal structure of CK2alpha in complex with an analogue of compound 22

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

3 x AU2: 2-(1~{H}-benzimidazol-2-yl)ethyl-[[3,5-bis(chloranyl)-4-phenyl-phenyl]methyl]azanium(Non-covalent)

AU2.1: 15 residues within 4Å: Chain A: L.44, G.45, V.52, N.117, F.120, L.123, Y.124, L.127, I.139, P.158, H.159, V.161, I.163, M.220, M.224 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.44, A:V.52, A:L.123, A:L.127, A:V.161, A:I.163, A:M.224 Hydrogen bonds: A:V.161 Water bridges: A:I.163 AU2.2: 11 residues within 4Å: Chain A: Q.35, D.36, Y.38, L.40, V.66, I.68, V.100, K.101, D.102, T.107, A.109 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Q.35, A:Q.35, A:L.40, A:I.68, A:V.100, A:D.102, A:A.109 Halogen bonds: A:D.102 AU2.3: 9 residues within 4Å: Chain A: L.202, V.203, D.204, Y.238, L.241, E.263, L.264, D.265, P.266 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Y.238, A:L.241, A:E.263 Hydrogen bonds: A:L.202, A:E.263, A:D.265

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Iegre, J. et al., Second-generation CK2 alpha inhibitors targeting the alpha D pocket. Chem Sci (2018)

Release Date

2018-09-05

Peptides

Casein kinase II subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Casein kinase II subunit alpha

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