5pb7.1 | SWISS-MODEL Template Library

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SMTL ID : 5pb7.1

PanDDA analysis group deposition -- Crystal Structure of BAZ2B in complex with N09440a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1:	5 residues within 4Å: Chain A: F.109, N.110, I.116 Ligands: EDO.2, 8H4.4 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.110
EDO.2:	5 residues within 4Å: Chain A: W.53, P.54, I.116 Ligands: EDO.1, 8H4.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:P.54 Water bridges: A:N.60
EDO.3:	6 residues within 4Å: Chain A: L.38, M.41, I.42, E.45, K.130, T.134 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.45, A:T.134

1 x 8H4: 1~{H}-indazol-5-amine(Non-covalent)

8H4.4:

6 residues within 4Å:

Chain A: V.59, V.64, N.110, I.116
Ligands: EDO.1, EDO.2

2 PLIP interactions:

2 interactions with chain A

Hydrophobic interactions: A:I.116
Hydrogen bonds: A:N.110

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Pearce, N.M. et al., A multi-crystal method for extracting obscured crystallographic states from conventionally uninterpretable electron density. Nat Commun (2017)

Release Date

2017-03-15

Peptides

Bromodomain adjacent to zinc finger domain protein 2B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Bromodomain adjacent to zinc finger domain protein 2B

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5pb8.1 | 5pb9.1 | 5pba.1 | 5pbb.1 | 5pbc.1 | 5pbd.1 | 5pbe.1 | 5pbf.1 | 5pbg.1 | 5pbh.1 | 5pbi.1 | 5pbj.1 | 5pbk.1 | 5pbl.1 | 5pbm.1 | 5pbn.1 | 5pbo.1 | 5pbp.1 | 5pbq.1 | 5pbr.1 | 5pbs.1 | 5pbt.1 | 5pbu.1 | 5pbv.1 | 5pbw.1 | 5pbx.1 | 5pby.1 | 5pbz.1 | 5pc0.1 | 5pc1.1 more...less...

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