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SMTL ID : 5qg9.1

PanDDA analysis group deposition -- Crystal structure of PTP1B in complex with compound_FMOOA000595a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.67 Å

Oligo State

monomer

Ligands

2 x JQ4: (1S,3S,4R)-3-[(1S)-1-hydroxypropyl]-2-(methylsulfonyl)-2-azabicyclo[2.2.2]octan-4-ol(Covalent)(Non-covalent)

JQ4.1:	6 residues within 4Å: Chain A: G.14, W.16, A.17, A.264, D.265, R.268 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:W.16, A:D.265 Water bridges: A:D.265 Salt bridges: A:D.265
JQ4.2:	11 residues within 4Å: Chain A: H.60, Q.61, E.97, W.100, E.101, D.137, T.138, N.139, L.140, N.162, T.164 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.97, A:N.162, A:T.164 Salt bridges: A:E.97

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.3:

3 residues within 4Å:

Chain A: H.54, S.55, F.256

3 PLIP interactions:

3 interactions with chain A

Hydrogen bonds: A:H.54, A:H.54, A:H.54

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Keedy, D.A. et al., An expanded allosteric network in PTP1B by multitemperature crystallography, fragment screening, and covalent tethering. Elife (2018)

Release Date

2018-10-10

Peptides

Tyrosine-protein phosphatase non-receptor type 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Tyrosine-protein phosphatase non-receptor type 1

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