SMTL ID : 5qio.1

Covalent fragment group deposition -- Crystal Structure of OUTB2 in complex with P11

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.46 Å

Oligo State

monomer

Ligands

1 x UNL: UNKNOWN LIGAND

UNL.1: 4 residues within 4Å: Chain A: R.25, D.195, T.196, A.197 5 PLIP interactions: 5 interactions with chain A Water bridges: A:R.25, A:R.25, A:R.25, A:R.25, A:E.29

1 x J4Y: (1S,2S)-N'-(chloroacetyl)-2-phenylcyclopropane-1-carbohydrazide(Covalent)

J4Y.2: 12 residues within 4Å: Chain A: K.41, G.42, D.43, R.44, N.45, C.46, F.47, E.169, T.217, S.218, H.219, Y.220 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:Y.220 Hydrogen bonds: A:D.43, A:D.43, A:R.44, A:C.46, A:E.169, A:S.218

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sethi, R. et al., Covalent fragment group deposition. To Be Published

Release Date

2019-12-18

Peptides

Ubiquitin thioesterase OTUB2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ubiquitin thioesterase OTUB2

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