SMTL ID : 5qiz.1

Covalent fragment group deposition -- Crystal Structure of OUTB2 in complex with PCM-0103080

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.63 Å

Oligo State

monomer

Ligands

1 x J64: N-[(5-chlorothiophen-2-yl)methyl]acetamide(Covalent)

J64.1: 10 residues within 4Å: Chain A: G.42, D.43, R.44, N.45, C.46, F.47, E.169, T.217, S.218, H.219 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.43, A:D.43, A:R.44, A:C.46, A:S.218 Water bridges: A:E.169

1 x UNL: UNKNOWN LIGAND

UNL.2: 4 residues within 4Å: Chain A: R.25, D.195, T.196, A.197 6 PLIP interactions: 6 interactions with chain A Water bridges: A:R.25, A:R.25, A:E.29, A:A.197, A:A.197, A:A.197

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sethi, R. et al., Covalent fragment group deposition. To Be Published

Release Date

2019-12-18

Peptides

Ubiquitin thioesterase OTUB2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ubiquitin thioesterase OTUB2

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