SMTL ID : 5qug.1

HumRadA1.2 soaked with napht-2,3-diol overnight at 1 mM

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.48 Å

Oligo State

monomer

Ligands

1 x D48: naphthalene-2,3-diol(Non-covalent)

D48.1: 9 residues within 4Å: Chain A: M.63, W.64, I.65, A.95, Y.96, A.97, L.108, Q.111, A.112 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.65, A:A.95, A:A.97

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 7 residues within 4Å: Chain A: E.33, F.34, G.35, S.36, G.37, K.38, T.39 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:G.35, A:S.36, A:G.37, A:K.38, A:T.39, A:T.39 Water bridges: A:G.37, A:K.38, A:K.38, A:Q.40 Salt bridges: A:K.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brear, P.B. et al., Optimisation of crystal forms for structure-guided drug discovery. To be published

Release Date

2021-03-03

Peptides

RadA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RadA

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