SMTL ID : 5r50.1

PanDDA analysis group deposition -- Crystal Structure of human NUDT22 in complex with N13371a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.87 Å

Oligo State

monomer

Ligands

2 x RY4: N-[4-(aminomethyl)phenyl]methanesulfonamide(Non-covalent)

RY4.1: 6 residues within 4Å: Chain A: G.156, H.157, P.158, E.159, E.190, E.248 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:E.190 Hydrogen bonds: A:E.159 RY4.2: 4 residues within 4Å: Chain A: Q.258, R.261, L.300, P.302 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Q.258, A:P.302

4 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3: 2 residues within 4Å: Chain A: R.142, T.250 No protein-ligand interaction detected (PLIP) DMS.4: 5 residues within 4Å: Chain A: L.188, L.199, L.200, L.202, Q.204 No protein-ligand interaction detected (PLIP) DMS.5: 2 residues within 4Å: Chain A: T.109, D.110 No protein-ligand interaction detected (PLIP) DMS.6: 8 residues within 4Å: Chain A: V.124, G.125, D.152, V.153, P.154, G.155, E.223, S.275 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:D.152, A:E.223

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Diaz-Saez, L. et al., PanDDA analysis group deposition. To Be Published

Release Date

2020-07-01

Peptides

Uridine diphosphate glucose pyrophosphatase NUDT22: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Uridine diphosphate glucose pyrophosphatase NUDT22

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