SMTL ID : 5r55.1

PanDDA analysis group deposition -- Crystal Structure of human NUDT22 in complex with N13369a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.48 Å

Oligo State

monomer

Ligands

1 x RYP: ~{N}-methyl-1-pyridin-4-yl-methanamine(Non-covalent)

RYP.1: 10 residues within 4Å: Chain A: V.124, G.125, R.140, D.152, V.153, G.155, G.156, S.221, E.223, S.275 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.153 Hydrogen bonds: A:D.152

3 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 3 residues within 4Å: Chain A: S.141, R.142, T.250 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.142 Water bridges: A:T.250, A:T.250 DMS.3: 3 residues within 4Å: Chain A: L.188, L.199, L.202 No protein-ligand interaction detected (PLIP) DMS.4: 2 residues within 4Å: Chain A: T.109, D.110 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Diaz-Saez, L. et al., PanDDA analysis group deposition. To Be Published

Release Date

2020-07-01

Peptides

Uridine diphosphate glucose pyrophosphatase NUDT22: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Uridine diphosphate glucose pyrophosphatase NUDT22

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