SMTL ID : 5r5l.1

PanDDA analysis group deposition -- Crystal Structure of human NUDT22 in complex with N13589a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.63 Å

Oligo State

monomer

Ligands

1 x S2S: 4-(methylsulfonylamino)benzamide(Non-covalent)

S2S.1: 8 residues within 4Å: Chain A: K.61, Y.88, F.91, P.121, R.140, E.146, H.157, R.219 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.91, A:F.91 Hydrogen bonds: A:R.140, A:R.140, A:E.146, A:H.157 pi-Stacking: A:H.157

4 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 3 residues within 4Å: Chain A: S.141, R.142, T.250 1 PLIP interactions: 1 interactions with chain A Water bridges: A:T.250 DMS.3: 4 residues within 4Å: Chain A: L.188, L.199, L.202, Q.204 No protein-ligand interaction detected (PLIP) DMS.4: 2 residues within 4Å: Chain A: T.109, D.110 No protein-ligand interaction detected (PLIP) DMS.5: 8 residues within 4Å: Chain A: V.124, G.125, D.152, V.153, P.154, G.155, E.223, S.275 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.275 Salt bridges: A:D.152, A:E.223

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Diaz-Saez, L. et al., PanDDA analysis group deposition. To Be Published

Release Date

2020-07-01

Peptides

Uridine diphosphate glucose pyrophosphatase NUDT22: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Uridine diphosphate glucose pyrophosphatase NUDT22

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