SMTL ID : 5rg5.1

Crystal Structure of Kemp Eliminase HG3.3b in unbound state, 277K

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.62 Å

Oligo State

homo-dimer

Ligands

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 8 residues within 4Å: Chain A: W.46, H.52, G.85, C.86, D.129, M.174, L.238, M.239 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:C.86, A:D.129 Salt bridges: A:H.52 ACT.3: 8 residues within 4Å: Chain B: W.46, H.52, G.85, C.86, D.129, M.174, L.238, M.239 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:P.47, B:D.129 Salt bridges: B:H.52

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 1 residues within 4Å: Chain A: K.194 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.194 SO4.4: 4 residues within 4Å: Chain A: F.65, R.120 Chain B: S.59, N.62 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Salt bridges: A:R.120 Hydrogen bonds: B:S.59, B:N.62 SO4.5: 2 residues within 4Å: Chain A: S.59 Chain B: R.120 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Broom, A. et al., Ensemble-based enzyme design can recapitulate the effects of laboratory directed evolution in silico. Nat Commun (2020)

Release Date

2020-07-22

Peptides

Kemp Eliminase HG3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Kemp Eliminase HG3

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