SMTL ID : 5ssx.1

Crystal Structure human formylglycine generating enzyme E130D mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.02 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: T.71, E.74, K.75, N.78 No protein-ligand interaction detected (PLIP)

1 x CU1: COPPER (I) ION(Non-covalent)

CU1.2: 4 residues within 4Å: Chain A: W.236, C.273, C.278, R.280 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.273, A:C.278, A:C.278

2 x CA: CALCIUM ION(Non-covalent)

CA.3: 7 residues within 4Å: Chain A: N.230, I.231, V.232, G.233, A.235, E.237, G.268 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:N.230, A:I.231, A:G.233, A:E.237, H2O.4 CA.4: 5 residues within 4Å: Chain A: N.196, I.197, D.210, F.212, Q.213 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:I.197, A:D.210, A:F.212, H2O.3, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kowal, J. et al., Crystal Structure of human formylglycine generating enzyme E130D mutant. To be published

Release Date

2023-08-23

Peptides

Formylglycine-generating enzyme: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Formylglycine-generating enzyme