SMTL ID : 5sxm.2 (1 other biounit)

WDR5 in complex with MLL Win motif peptidomimetic

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x ACE- ALA- ARG- THR- GLU- VAL- TYR- NH2: ACE-ALA-ARG-THR-GLU-VAL-TYR-NH2(Non-covalent)

ACE-ALA-ARG-THR-GLU-VAL-TYR-NH2.1: 22 residues within 4Å: Chain A: A.28, V.29, S.30, A.46, G.70, I.71, S.72, D.73, D.88, Y.112, F.114, C.115, F.130, D.153, P.154, S.156, Y.172, Y.241, C.242, F.244, I.286, L.302 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:A.28, A:Y.112, A:F.114, A:F.114, A:F.130, A:F.130, A:Y.172, A:Y.241, A:I.286, A:L.302 Hydrogen bonds: A:S.72, A:D.88, A:D.153, A:D.153, A:S.156, A:C.242 Water bridges: A:S.72, A:Y.172, A:K.240 Salt bridges: A:D.73 pi-Stacking: A:Y.172

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Alicea-Velazquez, N.L. et al., Targeted Disruption of the Interaction between WD-40 Repeat Protein 5 (WDR5) and Mixed Lineage Leukemia (MLL)/SET1 Family Proteins Specifically Inhibits MLL1 and SETd1A Methyltransferase Complexes. J.Biol.Chem. (2016)

Release Date

2016-09-07

Peptides

WD repeat-containing protein 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

WD repeat-containing protein 5

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