SMTL ID : 5syn.1 (3 other biounits)

Cocrystal structure of the human acyl protein thioesterase 2 with an isoform-selective inhibitor, ML349

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

monomer

Ligands

1 x 71T: 2-[4-(4-methoxyphenyl)piperazine-1-carbonyl]-5lambda~6~-thieno[3,2-c][1]benzothiopyran-5,5(4H)-dione(Non-covalent)

71T.1: 21 residues within 4Å: Chain A: L.33, L.66, N.67, L.78, G.80, L.81, S.82, P.83, A.85, E.87, S.122, Q.123, W.148, L.149, H.152, M.178, V.179, F.183, L.186, T.187, H.210 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.33, A:L.66, A:L.78, A:P.83, A:P.83, A:W.148, A:W.148, A:F.183, A:F.183 Hydrogen bonds: A:T.187 Water bridges: A:G.80, A:E.87

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: M.107, G.110, I.111 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:M.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Won, S.J. et al., Molecular Mechanism for Isoform-Selective Inhibition of Acyl Protein Thioesterases 1 and 2 (APT1 and APT2). ACS Chem. Biol. (2016)

Release Date

2016-10-26

Peptides

Acyl-protein thioesterase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Acyl-protein thioesterase 2

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