SMTL ID : 5t2u.1

short chain dehydrogenase/reductase family protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-tetramer

Ligands

4 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 30 residues within 4Å: Chain A: G.20, T.22, S.23, G.24, I.25, G.44, R.45, D.46, R.49, A.66, D.67, L.68, N.90, A.91, G.92, I.93, Y.94, T.113, I.140, T.141, T.142, Y.155, K.159, P.185, G.186, P.187, T.188, T.190, T.192, T.193 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:P.185 Hydrogen bonds: A:G.20, A:T.22, A:S.23, A:I.25, A:R.45, A:D.46, A:D.67, A:L.68, A:G.69, A:N.90, A:G.92, A:Y.94, A:K.159, A:T.188, A:T.188, A:T.190, A:T.192 Water bridges: A:T.22, A:G.26, A:D.46, A:R.49, A:R.49, A:N.90, A:Q.109 Salt bridges: A:R.45, A:R.49 NAP.2: 29 residues within 4Å: Chain B: G.20, T.22, S.23, G.24, I.25, G.44, R.45, D.46, R.49, A.66, D.67, L.68, N.90, A.91, G.92, Y.94, T.113, I.140, T.141, T.142, Y.155, K.159, P.185, G.186, P.187, T.188, T.190, T.192, T.193 28 PLIP interactions: 28 interactions with chain B Hydrophobic interactions: B:P.185 Hydrogen bonds: B:G.20, B:T.22, B:I.25, B:R.45, B:D.46, B:D.67, B:D.67, B:L.68, B:G.69, B:N.90, B:G.92, B:Y.155, B:K.159, B:T.188, B:T.188, B:T.192 Water bridges: B:T.22, B:T.22, B:S.23, B:S.23, B:G.26, B:R.45, B:R.49, B:N.90, B:Q.109 Salt bridges: B:R.45, B:R.49 NAP.3: 30 residues within 4Å: Chain C: G.20, T.22, S.23, G.24, I.25, G.44, R.45, D.46, R.49, A.66, D.67, L.68, N.90, A.91, G.92, I.93, Y.94, T.113, I.140, T.141, T.142, Y.155, K.159, P.185, G.186, P.187, T.188, T.190, T.192, T.193 26 PLIP interactions: 26 interactions with chain C Hydrophobic interactions: C:P.185 Hydrogen bonds: C:G.20, C:T.22, C:S.23, C:I.25, C:R.45, C:D.46, C:D.67, C:L.68, C:G.69, C:N.90, C:G.92, C:K.159, C:T.188, C:T.188, C:T.188, C:T.190, C:T.192 Water bridges: C:T.22, C:G.26, C:R.45, C:D.46, C:N.90, C:T.113 Salt bridges: C:R.45, C:R.49 NAP.4: 30 residues within 4Å: Chain D: G.20, T.22, S.23, G.24, I.25, R.45, D.46, R.49, A.66, D.67, L.68, G.69, N.90, A.91, G.92, I.93, Y.94, T.113, I.140, T.141, T.142, Y.155, K.159, P.185, G.186, P.187, T.188, T.190, T.192, T.193 26 PLIP interactions: 26 interactions with chain D Hydrophobic interactions: D:P.185 Hydrogen bonds: D:G.20, D:T.22, D:I.25, D:R.45, D:D.46, D:D.67, D:D.67, D:L.68, D:G.69, D:N.90, D:G.92, D:Y.94, D:Y.155, D:K.159, D:T.188, D:T.188, D:T.192, D:T.192 Water bridges: D:R.49, D:R.49, D:N.90, D:N.90 Salt bridges: D:R.45, D:R.49 pi-Cation interactions: D:R.45

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Blaise, M. et al., Binding of NADP(+) triggers an open-to-closed transition in a mycobacterial FabG beta-ketoacyl-ACP reductase. Biochem. J. (2017)

Release Date

2017-02-15

Peptides

Oxidoreductase, short chain dehydrogenase/reductase family protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Oxidoreductase, short chain dehydrogenase/reductase family protein

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